Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs77931345 chr21:44282099 G/T 1.16E-13 519 42.75 33.97 3.37 KM Plot
KIRC rs78026790 chr7:7713342 C/T 4.11E-5 522 38.42 48.33 5.47 KM Plot
KIRC rs78144315 chr21:44254894 C/T 2.1E-7 516 41.13 31.75 7.18 KM Plot
KIRC rs78159520 chr3:48349023 T/C 2.79E-5 520 39.7 41.27 19.13 KM Plot
KIRC rs78221159 chr21:44333652 A/G 6.94E-10 514 42.47 33.07 7.18 KM Plot
KIRC rs78236866 chr11:34774031 G/C 1.38E-7 523 40.28 36.92 3.3 KM Plot
KIRC rs78285663 chr16:86609244 G/A 0 519 39.7 41.47 2.12 KM Plot
KIRC rs78291044 chr21:44277236 G/A 6.14E-14 519 42.4 32.42 3.37 KM Plot
KIRC rs78339676 chr2:2622433 T/C 4.62E-5 522 39.23 41.27 8.35 KM Plot
KIRC rs78385274 chr2:67531571 G/C 1.98E-7 523 39.85 37.73 2.03 KM Plot
KIRC rs78443123 chr21:47953331 G/T 1.19E-5 524 39.17 43.25 6.87 KM Plot
KIRC rs78463142 chr21:47964481 A/G 1.36E-5 517 39 40.6 6.87 KM Plot
KIRC rs78576999 chr6:2376807 A/G 9.99E-9 523 40 39.88 12.07 KM Plot
KIRC rs7858237 chr9:97390642 C/T 1.43E-5 526 4.63 41.27 39.08 KM Plot
KIRC rs78654337 chr21:47824372 A/G 2.73E-5 519 38.83 47.1 6.87 KM Plot